EGAF00005319351 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005319351
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3558911
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	56

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG	27401	0.7699265308966703	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGATCGCTTGAGCCC	12950	0.3638753540057619	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAGGATCGCTTGAGTCC	11212	0.3150401906650658	No Hit
GGCGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG	7456	0.20950228876192747	No Hit
GGGCCGGTTCACCCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATTGATGCCGAACTT	7250	0.203714001277357	No Hit
GGGGACTCTTCTGGTCCCCACAGACTCAGAGAGAACCCACCATGGTGCTGTCTCCTGCCGACAAGACCAACGTCA	7224	0.20298344072105204	No Hit
CGGGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG	5359	0.15057977004763534	No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN	3596	0.10104214463356909	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTCTACG	5225	64.8439	4
TCTACGG	5240	64.72392	5
TACGGCC	5300	63.993	7
CTACGGC	5420	62.637882	6
ACGGCCA	5700	59.683304	8
CGGCCAT	5710	59.4583	9
GGGTCTA	4200	58.96527	2
GCCATAC	5770	58.12055	11
GCGTCTA	1040	57.217102	2
CCATACC	5880	56.97797	12
CGTCTAC	1230	56.48841	3
CCGAACT	1195	56.25231	67
CCTGGTT	8735	55.802593	70
CATACCA	6025	55.663803	13
GGCCATA	6155	55.159527	10
GCGCGGT	6555	53.42032	9
TACCACC	6315	52.99716	15
GCCGGTT	1270	50.91752	3
CTGAACG	6635	50.61176	22
TGGCGCG	6955	50.593136	15