EGAF00005319353 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005319353
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3527533
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	56

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG	27113	0.7686108110115484	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGATCGCTTGAGCCC	12812	0.363200004082173	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAGGATCGCTTGAGTCC	11431	0.3240508309915173	No Hit
GGCGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG	7589	0.21513618724474018	No Hit
GGGGACTCTTCTGGTCCCCACAGACTCAGAGAGAACCCACCATGGTGCTGTCTCCTGCCGACAAGACCAACGTCA	7065	0.20028161324075494	No Hit
GGGCCGGTTCACCCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATTGATGCCGAACTT	6998	0.19838226885474922	No Hit
CGGGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG	5212	0.14775198417704383	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TCTACGG	5550	63.78489	5
GTCTACG	5535	63.771282	4
TACGGCC	5625	63.1188	7
CTACGGC	5685	62.21058	6
ACGGCCA	6035	59.056213	8
CGGCCAT	6140	57.878204	9
GGGTCTA	4470	57.27994	2
GCCATAC	6235	56.775635	11
CCATACC	6385	55.387165	12
GCGTCTA	1150	55.062653	2
CGTCTAC	1320	54.731934	3
CATACCA	6475	54.510273	13
CCTGGTT	9215	54.50782	70
GGCCATA	6555	54.423836	10
CGGTCTA	685	53.756424	2
GCGCGGT	6080	53.47014	9
TACCACC	6660	53.047752	15
TGGCGCG	6480	50.27427	15
CTGAACG	6960	50.17847	22
ATACCAC	7080	49.852264	14