EGAF00005319359 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005319359
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3437022
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	57

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG	13358	0.3886504072420834	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGATCGCTTGAGCCC	10739	0.3124507204201777	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAGGATCGCTTGAGTCC	9038	0.2629602021750224	No Hit
GGGGACTCTTCTGGTCCCCACAGACTCAGAGAGAACCCACCATGGTGCTGTCTCCTGCCGACAAGACCAACGTCA	7664	0.2229837341745267	No Hit
GGGCCGGTTCACCCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATTGATGCCGAACTT	4879	0.14195428484309963	No Hit
GGGGGGGAAGGTGGCTCGGGGGGCCCCGTCCGTCCGTCCGTCCGTCCTCC	4379	0.1274068074047824	No Hit
GGCGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG	3795	0.11041535375682786	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TCTACGG	2990	61.8696	5
GTCTACG	3040	60.85201	4
TACGGCC	3025	60.69299	7
CTACGGC	3130	59.10227	6
ACGGCCA	3320	55.50838	8
GCCATAC	3380	53.398563	11
CGGCCAT	3470	53.20852	9
CCTGGTT	4960	51.62671	70
GGGTCTA	2665	51.388065	2
CCATACC	3520	51.37373	12
GCGCGGT	5115	51.373287	9
CCGAACT	915	50.01659	67
GCGTCTA	665	49.92452	2
CATACCA	3670	49.17977	13
GGCCATA	3805	47.979424	10
TACCACC	3790	47.896324	15
CTGAACG	3800	47.801598	22
GAACGCG	3800	47.533985	24
ATCTCGT	3785	47.18554	35
TGAACGC	3810	47.13195	23