EGAF00005319361 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005319361
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3424203
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	57

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG	13819	0.40356836320743833	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGATCGCTTGAGCCC	11295	0.32985778004399857	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAGGATCGCTTGAGTCC	9189	0.2683544170716514	No Hit
GGGGACTCTTCTGGTCCCCACAGACTCAGAGAGAACCCACCATGGTGCTGTCTCCTGCCGACAAGACCAACGTCA	7858	0.22948405804211958	No Hit
GGGCCGGTTCACCCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATTGATGCCGAACTT	5095	0.14879374850147611	No Hit
GGGGGGGAAGGTGGCTCGGGGGGCCCCGTCCGTCCGTCCGTCCGTCCTCC	4382	0.12797138487408602	No Hit
GGCGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG	3824	0.111675622035259	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTCTACG	2880	62.051125	4
TACGGCC	2900	61.503986	7
TCTACGG	2900	61.384792	5
CTACGGC	2995	59.668526	6
ACGGCCA	3160	56.552917	8
GCCATAC	3265	54.414227	11
CGGCCAT	3290	54.21324	9
GCGTCTA	590	53.32565	2
CCATACC	3375	52.4359	12
GCGCGGT	5235	52.427048	9
GGGTCTA	2650	51.404022	2
GGCCATA	3590	49.58443	10
CCTGGTT	5030	49.4244	70
CGGTCTA	365	49.255787	2
GAACGCG	3570	49.245632	24
CATACCA	3605	48.994595	13
TGGCGCG	5590	48.912094	15
CTGAACG	3595	48.600155	22
TGAACGC	3640	48.007755	23
CGTCTAC	730	47.82446	3