EGAF00005319365 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005319365
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3480262
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	57

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG	13467	0.3869536259051761	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGATCGCTTGAGCCC	11115	0.3193725070124031	No Hit
GGGGCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAGGATCGCTTGAGTCC	9040	0.2597505590096378	No Hit
GGGGACTCTTCTGGTCCCCACAGACTCAGAGAGAACCCACCATGGTGCTGTCTCCTGCCGACAAGACCAACGTCA	8016	0.23032748683863455	No Hit
GGGCCGGTTCACCCCTCCTTAGGCAACCTGGTGGTCCCCCGCTCCCGGGAGGTCACCATATTGATGCCGAACTT	4942	0.14200080338779092	No Hit
GGGGGGGAAGGTGGCTCGGGGGGCCCCGTCCGTCCGTCCGTCCGTCCTCC	4259	0.12237584411748312	No Hit
GGCGTCTACGGCCATACCACCCTGAACGCGCCCGATCTCGTCTGATCTCG	3901	0.11208926224519879	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTCTACG	2630	63.225098	4
TCTACGG	2645	62.869255	5
TACGGCC	2660	62.254787	7
CTACGGC	2780	59.567535	6
ACGGCCA	2950	56.01763	8
GGGTCTA	2310	53.875423	2
GCCATAC	3095	53.05812	11
CGGCCAT	3130	52.796177	9
GCGCGGT	5345	52.779022	9
CATACCA	3225	51.239464	13
CCATACC	3260	50.583305	12
GAACGCG	3290	49.751827	24
TGGCGCG	5725	49.57701	15
CCGAACT	750	48.211826	67
GGCCATA	3435	48.108307	10
CCTGGTT	4865	48.00977	70
TGAACGC	3435	47.949078	23
CGCGGTG	5880	47.859264	10
CTGAACG	3450	47.83539	22
ATCTCGT	3475	47.107323	35