FastQCFastQC Report
Thu 12 May 2022
EGAF00005319581

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005319581
File typeConventional base calls
EncodingIllumina 1.5
Total Sequences63646666
Sequences flagged as poor quality0
Sequence length100
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CCCAAACCCACTCCACCTTACTACCAGACAACCTTAACCAAACCATTTAC1305230.20507437105975038No Hit
CCGTCATCTACTCTACCATCTTTGCAGGCACACTCATCACTGCGCTAAGC651120.10230229498588347No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)