FastQCFastQC Report
Fri 13 May 2022
EGAF00005321481

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005321481
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences478978874
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATCGGAAGAGCACACGTCTGAACTCCAGTCACCGGCTATGATCTCGTATG27999110.5845583494356789TruSeq Adapter, Index 7 (97% over 35bp)
AGCCATATGAGGGCGTCCATCTCGAAGGAGTCGCCAGCGATAACCGGAGT26758530.5586578334141726No Hit
AGCCATATGAGTGAATTGTTCGCGTTTACCTTGCGTGTACGCGCAGGAAA16346700.3412822754266194No Hit
AGCCATATGAGGTACGCTGGACTTTGTAGGATACCCTCGCTTTCCTGCTC9113380.19026684671691804No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)