FastQCFastQC Report
Mon 30 May 2022
EGAF00005321485

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005321485
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences455681538
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATCGGAAGAGCACACGTCTGAACTCCAGTCACTCCGCGAAATCTCGTATG20409940.4478992080649096TruSeq Adapter, Index 6 (97% over 35bp)
CCTGCCCCTGTGGCGTCCATCTCGAAGGAGTCGCCAGCGATAACCGGAGT14032970.3079556407220518No Hit
CCTGCCCCTGTTGAATTGTTCGCGTTTACCTTGCGTGTACGCGCAGGAAA8455150.1855495405214332No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)