FastQCFastQC Report
Wed 27 Apr 2022
EGAF00005322319

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005322319
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences4252209
Sequences flagged as poor quality0
Sequence length20-137
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CTGCATAGTATTCCATGGTGTATATGTGCCACATTTTCTTAATCCAGTCT219040.5151204938421419No Hit
CAGCTAACAGAGTTGAACCTTTCTATTGACAGAGCAGTTTTGAAACAGTC68750.16168066997647576No Hit
CTGCTGTCTACTTTTTATACGTAATCCCGTTTCCAACGAAATCCTCCAAG60610.14253767865126105No Hit
CTGCTATAAAGACACATGCACACGTATGTTTATTGCGGCACTATTCACAA47580.11189478221790133No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)