FastQCFastQC Report
Wed 11 May 2022
EGAF00005322366

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005322366
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences26274304
Sequences flagged as poor quality0
Sequence length13-126
%GC50

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN1190030.4529254133620437No Hit
CTGCATAGTATTCCATGGTGTATATGTGCCACATTTTCTTAATCCAGTCT1047310.3986061819182727No Hit
CAGCTAACAGAGTTGAACCTTTCTATTGACAGAGCAGTTTTGAAACAGTC298830.11373469683535671No Hit
CTGCTGTCTACTTTTTATACGTAATCCCGTTTCCAACGAAATCCTCCAAG289350.11012660887230352No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)