FastQCFastQC Report
Thu 2 May 2024
EGAF00005322373

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005322373
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences36465930
Total Bases4.1 Gbp
Sequences flagged as poor quality0
Sequence length8-121
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CTGCATAGTATTCCATGGTGTATATGTGCCACATTTTCTTAATCCAGTCT1409050.3864017728328881No Hit
CTGCTGTCTACTTTTTATACGTAATCCCGTTTCCAACGAAATCCTCCAAG584270.16022352919560806No Hit
CAGCTAACAGAGTTGAACCTTTCTATTGACAGAGCAGTTTTGAAACAGTC570300.15639255601050076No Hit

[OK]Adapter Content

Adapter graph