FastQCFastQC Report
Wed 27 Apr 2022
EGAF00005322383

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005322383
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2336030
Sequences flagged as poor quality0
Sequence length21-137
%GC49

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CTGCATAGTATTCCATGGTGTATATGTGCCACATTTTCTTAATCCAGTCT184420.7894590394815135No Hit
CTGCTATAAAGACACATGCACACGTATGTTTATTGCGGCACTATTCACAA56910.24361844668090737No Hit
CTGCTATAAAGACACATGCACACGTATGTTTATTGCGGCATTATTCACAA41410.17726655907672417No Hit
CAGCCATTCAAGCAATCCTATACAACCGTATCGGCGATATCGGTTTCATC30150.12906512330749179No Hit
CTGCTATAAAGACACATGCACACGTATGTTTATTGTGGCACTATTCACAA26110.1117708248609821No Hit
CTGCTGCTAGGAGGAGGCCTAGTAGTGGGGTGAGGCTTGGATTAGCGTTT25360.10856024965432806No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)