FastQCFastQC Report
Thu 16 Jun 2022
EGAF00005322388

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005322388
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences53585863
Sequences flagged as poor quality0
Sequence length4-126
%GC49

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CTGCATAGTATTCCATGGTGTATATGTGCCACATTTTCTTAATCCAGTCT3551320.66273449771631No Hit
CTGCTATAAAGACACATGCACACGTATGTTTATTGCGGCACTATTCACAA849250.1584839643246951No Hit
CTGCTATAAAGACACATGCACACGTATGTTTATTGCGGCATTATTCACAA613450.11447982091843888No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)