FastQCFastQC Report
Wed 27 Apr 2022
EGAF00005322461

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005322461
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences8874273
Sequences flagged as poor quality0
Sequence length4-121
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CTGCATAGTATTCCATGGTGTATATGTGCCACATTTTCTTAATCCAGTCT452360.5097431643132908No Hit
CTGCTGCTAGGAGGAGGCCTAGTAGTGGGGTGAGGCTTGGATTAGCGTTT172350.19421309215977467No Hit
CTGCTATAAAGACACATGCACACGTATGTTTATTGCGGCACTATTCACAA120280.1355378632142599No Hit
CAGCCATTCAAGCAATCCTATACAACCGTATCGGCGATATCGGTTTCATC119090.13419690829885444No Hit
CTGCGTGCTGGGAGAACCACTGCTCTCTTCAAAGCTGTCAGACAGGGACA89160.10047020189710189No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)