FastQCFastQC Report
Wed 27 Apr 2022
EGAF00005322526

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005322526
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences3330874
Sequences flagged as poor quality0
Sequence length11-151
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CTTCGCACGCCTGCATAGTATTCCATGGTGTATATGTGCCACATTTTCTT194580.5841710013648069No Hit
CTTCGCACGCCTGCTATAAAGACACATGCACACGTATGTTTATTGCGGCA65550.1967951954952364No Hit
CTTCGCACGCCAGCTAACAGAGTTGAACCTTTCTATTGACAGAGCAGTTT56780.17046576964484397No Hit
CTTCGCACGCCTGCTGTCTACTTTTTATACGTAATCCCGTTTCCAACGAA40590.12185990824029969No Hit
CTTCGCACGCCTGCTGTCTACTTTCTATTTGTAATCCCGTTTCCAACGAA36980.111021911966649No Hit
CTTCGCACGCCAGCACTATTCACAATAGCAAAGACTTGGAACCAACCCAA34710.10420688383889634No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)