FastQCFastQC Report
Wed 8 May 2024
EGAF00005322539

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005322539
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences4065736
Total Bases514.9 Mbp
Sequences flagged as poor quality0
Sequence length10-137
%GC49

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CTGCATAGTATTCCATGGTGTATATGTGCCACATTTTCTTAATCCAGTCT183660.4517263295009809No Hit
CTGCTATAAAGACACATGCACACGTATGTTTATTGCGGCACTATTCACAA44820.11023834306998782No Hit

[OK]Adapter Content

Adapter graph