FastQCFastQC Report
Fri 10 May 2024
EGAF00005322569

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005322569
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13528459
Total Bases1.5 Gbp
Sequences flagged as poor quality0
Sequence length9-121
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CTGCATAGTATTCCATGGTGTATATGTGCCACATTTTCTTAATCCAGTCT735920.5439791775249494No Hit
CTGCGTGCTGGGAGAACCACTGCTCTCTTCAAAGCTGTCAGACAGGGACA156220.11547508847829602No Hit
CTGCTATAAAGACACATGCACACGTATGTTTATTGCGGCACTATTCACAA153020.11310970451253909No Hit

[OK]Adapter Content

Adapter graph