FastQCFastQC Report
Wed 11 May 2022
EGAF00005322575

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005322575
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences29906861
Sequences flagged as poor quality0
Sequence length6-121
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CTGCATAGTATTCCATGGTGTATATGTGCCACATTTTCTTAATCCAGTCT988630.3305696308281902No Hit
CTGCATCAAAAGAAAGGTTCAACTCTGTTAGTTGAGGACACACATCACAA764500.25562696131834095No Hit
CAGCTTTGAAACTCTATTTTTGTGGATTCTGCAAATTGATATTTAGATTG609410.2037692956141402No Hit
CAGCTAACAGAGTTGAACCTTTCTATTGACAGAGCAGTTTTGAAACAGTC457940.1531220545011394No Hit
CTGCTGTCTACTTTTTATACGTAATCCCGTTTCCAACGAAATCCTCCAAG321210.10740344832578719No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)