FastQCFastQC Report
Fri 10 May 2024
EGAF00005322585

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005322585
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13055959
Total Bases1.5 Gbp
Sequences flagged as poor quality0
Sequence length6-121
%GC49

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CTGCATAGTATTCCATGGTGTATATGTGCCACATTTTCTTAATCCAGTCT460110.35241379051512034No Hit
CTGCGTGCTGGGAGAACCACTGCTCTCTTCAAAGCTGTCAGACAGGGACA188380.1442866050666979No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)