FastQCFastQC Report
Thu 12 May 2022
EGAF00005322603

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005322603
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences50062904
Sequences flagged as poor quality0
Sequence length21-121
%GC50

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CTGCATAGTATTCCATGGTGTATATGTGCCACATTTTCTTAATCCAGTCT2234450.4463284830620294No Hit
CTGCTGTCTACTTTTTATACGTAATCCCGTTTCCAACGAAATCCTCCAAG712290.14227900163362475No Hit
CAGCTAACAGAGTTGAACCTTTCTATTGACAGAGCAGTTTTGAAACAGTC638280.12749560033513038No Hit
CTGCTGTCTACTTTCTATTTGTAATCCCGTTTCCAACGAAATCCTCAGAA524610.10479016558847644No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)