FastQCFastQC Report
Wed 11 May 2022
EGAF00005322613

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005322613
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences26175564
Sequences flagged as poor quality0
Sequence length11-121
%GC49

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CTGCATAGTATTCCATGGTGTATATGTGCCACATTTTCTTAATCCAGTCT880410.33634805347460706No Hit
CTGCATCAAAAGAAAGGTTCAACTCTGTTAGTTGAGGACACACATCACAA694030.2651442391078947No Hit
CAGCTTTGAAACTCTATTTTTGTGGATTCTGCAAATTGATATTTAGATTG546270.20869464359965653No Hit
CAGCTAACAGAGTTGAACCTTTCTATTGACAGAGCAGTTTTGAAACAGTC403700.15422781339114602No Hit
CTGCTGTCTACTTTTTATACGTAATCCCGTTTCCAACGAAATCCTCCAAG286530.10946469004450106No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)