FastQCFastQC Report
Sat 4 Jun 2022
EGAF00005322620

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005322620
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences36313203
Sequences flagged as poor quality0
Sequence length13-126
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CTGCATAGTATTCCATGGTGTATATGTGCCACATTTTCTTAATCCAGTCT1299150.3577624369846967No Hit
CAGCTAACAGAGTTGAACCTTTCTATTGACAGAGCAGTTTTGAAACAGTC798360.2198539192480487No Hit
CTGCTGTCTACTTTTTATACGTAATCCCGTTTCCAACGAAATCCTCCAAG424100.11678947736998029No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)