FastQCFastQC Report
Wed 27 Apr 2022
EGAF00005322629

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005322629
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences4370046
Sequences flagged as poor quality0
Sequence length19-137
%GC49

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CTGCATAGTATTCCATGGTGTATATGTGCCACATTTTCTTAATCCAGTCT284540.6511144276284506No Hit
CTGCGTGCTGGGAGAACCACTGCTCTCTTCAAAGCTGTCAGACAGGGACA72310.16546736578974228No Hit
CTGCTATAAAGACACATGCACACGTATGTTTATTGCGGCACTATTCACAA61330.14034177214610555No Hit
CTGCTATAAAGACACATGCACACGTATGTTTATTGCGGCATTATTCACAA44790.10249320030040873No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)