FastQCFastQC Report
Wed 27 Apr 2022
EGAF00005322636

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005322636
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences3760416
Sequences flagged as poor quality0
Sequence length14-151
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GATTCTGCATAGTATTCCATGGTGTATATGTGCCACATTTTCTTAATCCA200260.5325474628338992No Hit
GATTCTGCTATAAAGACACATGCACACGTATGTTTATTGCGGCACTATTC45670.12144932901040736No Hit
GATTCAGCTAACAGAGTTGAACCTTTCTATTGACAGAGCAGTTTTGAAAC38490.10235569681652243No Hit
GATTCTGCTGTCTACTTTTTATACGTAATCCCGTTTCCAACGAAATCCTC38210.10161109834656591No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)