FastQCFastQC Report
Wed 27 Apr 2022
EGAF00005322648

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005322648
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences10021560
Sequences flagged as poor quality0
Sequence length17-126
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CTGCATAGTATTCCATGGTGTATATGTGCCACATTTTCTTAATCCAGTCT491100.4900434662866859No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN326940.32623663381748946No Hit
CAGCTAACAGAGTTGAACCTTTCTATTGACAGAGCAGTTTTGAAACAGTC177830.17744742335524608No Hit
CTGCTGTCTACTTTTTATACGTAATCCCGTTTCCAACGAAATCCTCCAAG106990.10675982581554169No Hit
CTGCTGTCTACTTTCTATTTGTAATCCCGTTTCCAACGAAATCCTCAGAA104290.10406563449203517No Hit
CTGCTATAAAGACACATGCACACGTATGTTTATTGCGGCACTATTCACAA101570.10135148619576193No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)