FastQCFastQC Report
Wed 27 Apr 2022
EGAF00005323610

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005323610
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences34802
Sequences flagged as poor quality0
Sequence length150-151
%GC35

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CTAACCCCGAAACAACCAAACTCCACACACCCTCACTAAAACATACAACA2927084.1043618182863No Hit
CTAACCCCGAAACAACCAAACTCCACACACCCTCACTAAAACATACGACA2430.69823573357853No Hit
CTAACCCCGAAACAACCAAACTCCACACACCCTCACTAAAACGTACAACA1740.4999712660191943No Hit
CTAACCCCGAAACAACCAAACTCCACACACCCTCACTAAAACATACAACG1690.4856042756163439No Hit
CTAACCCCGAAACAACCAAACTCCGCACACCCTCACTAAAACATACAACA1660.47698408137463366No Hit
CTAACCCCGAAACAACCACACTCCACACACCCTCACTAAAACATACAACA1530.43962990632722254No Hit
CTAACCCCGAAACAACCAAACTCCACACGCCCTCACTAAAACATACAACA1510.43388311016608244No Hit
CTAACCCCGAAACAACCAAACTCCACACACCCTCACTAAGACATACAACA1450.4166427216826619No Hit
CTAACCCCGAAACAACCAAACTCCACACACCCTCACTAAAGCATACAACA1420.4080225274409517No Hit
CTAACCCCGAAACAACCAAACTCCACACACCCCCACTAAAACATACAACA1390.39940233319924145No Hit
CTAACCCCGACACAACCAAACTCCACACACCCTCACTAAAACATACAACA1360.39078213895753117No Hit
CTAACCCCGAAACAACCAAACTCCACACACCCTCACTAAAACATACAGCA1320.37928854663525086No Hit
CTAACCCCGAAACAACCAAACCCCACACACCCTCACTAAAACATACAACA1240.3563013619906902No Hit
CTAACCCCGAAACAACCAAACTCCACACACCCTCACTAAAACATGCAACA1220.35055456582955No Hit
CTAACCCCGAAACAACCAACTCCACACACCCTCACTAAAACATACAACAT1160.33331417734612956No Hit
CTAACCCCGAAACAACCAAACTCCACACACCCTCGCTAAAACATACAACA1150.3304407792655594No Hit
CTAACCCCGAAACAACCAAACTCCACACACCCTCACTGAAACATACAACA1120.3218205850238492No Hit
CTAACCCCGAAACAACCAAACTCCACACACCCTCACTAGAACATACAACA1060.3045801965404287No Hit
CTAACCCCGAAACAACCAAACTCCACACACCCTCACTAACACATACAACA920.2643526234124476No Hit
CTAACCCCGAAACAACCAAACTCCACACACCCTCACCAAAACATACAACA890.25573242917073735No Hit
ATAACCCCGAAACAACCAAACTCCACACACCCTCACTAAAACATACAACA790.2269984483650365No Hit
CTAACCCCGAAACAACCAAACTCCACACACCCTCACTAAAACACACAACA780.22412505028446641No Hit
CTAACCCCGAAACAACCAAACTCCACGCACCCTCACTAAAACATACAACA680.19539106947876558No Hit
CTAACCCCGAACAACCAAACTCCACACACCCTCACTAAAACATACAACAT500.14366990402850413No Hit
CTAACCCCGAAACAACAAACTCCACACACCCTCACTAAAACATACAACAT500.14366990402850413No Hit
CTAACCCCGAAACAACCAAACTCCCCACACCCTCACTAAAACATACAACA400.11493592322280327No Hit
CTAACCCCGAAACAATCAAACTCCACACACCCTCACTAAAACATACAACA400.11493592322280327No Hit
CTAACCCCGAAACAACCAAATCCACACACCCTCACTAAAACATACAACAT360.10344233090052296No Hit
TTAACCCCGAAACAACCAAACTCCACACACCCTCACTAAAACATACAACA360.10344233090052296No Hit
CTAACTCCGAAACAACCAAACTCCACACACCCTCACTAAAACATACAACA350.10056893281995287No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)