FastQCFastQC Report
Wed 27 Apr 2022
EGAF00005323611

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005323611
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences28668
Sequences flagged as poor quality0
Sequence length148-151
%GC44

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GAAAATTTATAAGATTGCGTAAAGTTGTAAGGTTCGGAGTTTCGTGCGGT2020370.4723036137854No Hit
GAAAATTTATAAGATTGCGTAAAGTTGTAAGGTTCGGAGTTTTGTGCGGT23038.033347286172736No Hit
GAAAATTTATAAGATTGCGTAAAGTTGTAAGGTTTGGAGTTTCGTGCGGT8602.9998604716059716No Hit
GAAAATTTATAAGATTGCGTAAAGTTGTAAGGTTCGGAGTTTCGTGTGGT4681.6324822101297616No Hit
GAAAATTTATAAGATTGCGTAAAGTTGTAAGGTTTGGAGTTTTGTGCGGT3161.1022743128226593No Hit
GAAAATTTATAAGATTGCGTAAAGTTGTAAGGTTCGGAGTTCCGTGCGGT2030.7081065996930375No Hit
GAAAATTTATAAGATTGCGTAAAGTTGTAAGATTCGGAGTTTCGTGCGGT1900.6627598716338775No Hit
GAAAATTTATAAGATTGCGTAAAGTTGTAAGGCTCGGAGTTTCGTGCGGT1690.5895074647690804No Hit
GAAAATTTATAAGATTGCGTAAAGTTGTAAGGTTCGGAGCTTCGTGCGGT1670.5825310450676713No Hit
GAAAATTTATAAGATTGCGTAAAGTTGTAAGGTTCGGAGTTTCGTGCGGC1540.5371843170085112No Hit
GAAAATTTATAAGATTGCGTAAAGTTGTAAGGTTCGGAGTTTTGTGTGGT1450.5057904283521697No Hit
GAAAATTTATAAGATTGCGTAAAGTTGTAGGGTTCGGAGTTTCGTGCGGT1010.35230919492116647No Hit
GAAAATTTATAAGATTGCGTAAAGTTGTAAGGTTCGGGGTTTCGTGCGGT1000.34882098507046183No Hit
GAAAATTTATAAGATTGCGTAAAGTTGTAAGGTCCGGAGTTTCGTGCGGT950.33137993581693875No Hit
GAAAATTTATAAGATTGCGTAAAGTTGTAAGGTTCGGAGTCTCGTGCGGT870.3034742570113018No Hit
GAAAATTTATAAGATTGCGTAAAGTTGTAAAGTTCGGAGTTTCGTGCGGT770.2685921585042556No Hit
GAAAATTTATAAGATTGCGTAAAGTTATAAGGTTCGGAGTTTCGTGCGGT700.24417468954932328No Hit
GAAAATTTATAAGATTGCGTAAAGCTGTAAGGTTCGGAGTTTCGTGCGGT630.21975722059439096No Hit
GAAAATTTATAAGATTGCGTAAAATTGTAAGGTTCGGAGTTTCGTGCGGT570.19882796149016327No Hit
GAAAATTTATAAGATTGCGTAAAGTTGTAAGGTTCGGAGTTTCGCGCGGT480.1674340728338217No Hit
GAAAATTTATAAGATTGCGTAAAGTTGTAAGGTTCGGAGTTTCGTGCGGA470.16394586298311706No Hit
GAAAATTTATAAGATTGCGTAAAGTTGTAAGGTTTGGAGTTTTGTGTGGT460.16045765313241245No Hit
GAAAATTTATAAGATTGCGTAAAGTTGTAAGGTTCGGAGTTTCGTGCGGG430.1499930235802986No Hit
GAAAATTTATAAGATTGCGTAAAGATGTAAGGTTCGGAGTTTCGTGCGGT420.14650481372959395No Hit
GAAAATTTATAAGATTACGTAAAGTTGTAAGGTTCGGAGTTTCGTGCGGT390.13604018417748012No Hit
GAAAATTTATAAGATTGCGTAAAGTTGTAAGGTTCGGAGTTTCGTGCTGT380.13255197432677548No Hit
GAAAATTTATAAGATTGTGTAAAGTTGTAAGGTTCGGAGTTTCGTGCGGT360.12557555462536626No Hit
GAAAATTTATAAGATTGCATAAAGTTGTAAGGTTCGGAGTTTCGTGCGGT340.11859913492395702No Hit
GAAAATTTATAAAATTGCGTAAAGTTGTAAGGTTCGGAGTTTCGTGCGGT330.11511092507325241No Hit
GAAAATTTATAAGACTGCGTAAAGTTGTAAGGTTCGGAGTTTCGTGCGGT320.1116227152225478No Hit
GAAAATTTATAAGATTGCGTAAAGTGTAAGGTTCGGAGTTTCGTGCGGTT300.10464629552113855No Hit
GAAAATTTATAAGATTGCGTAAAGTTGTAAGGTTCGGAGTTTTGTGCGGC300.10464629552113855No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)