FastQCFastQC Report
Wed 27 Apr 2022
EGAF00005323618

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005323618
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences15965
Sequences flagged as poor quality0
Sequence length138-151
%GC42

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CTAACCCCGAAACAACCAAACTCCGCACGCCCTCGCTAAAACGTACGACG477429.902912621359224No Hit
CTAACCCCGAAACAACCAAACTCCACACGCCCTCGCTAAAACGTACGACG15009.395552771688068No Hit
CTAACCCCGAAACAACCAAACTCCGCACGCCCTCGCTAAAACATACGACG10316.457876605073598No Hit
CTAACCCCGAAACAACCAAACTCCACACACCCTCACTAAAACATACAACA5733.5891011587848416No Hit
CTAACCCCGAAACAACCAAACTCCGCACACCCTCGCTAAAACGTACGACG5483.4325086125900404No Hit
CTAACCCCGAAACAACCAAACTCCGCACGCCCTCGCTAAAACGTACGACA5403.3823989978077043No Hit
CTAACCCCGAAACAACCAAACTCCACACACCCTCGCTAAAACGTACGACG4332.7121829000939552No Hit
CTAACCCCGAAACAACCAAACTCCACACGCCCTCGCTAAAACATACGACG3842.4052615095521457No Hit
CTAACCCCGAAACAACCAAACTCCGCACGCCCTCACTAAAACGTACGACG3632.2737237707485125No Hit
CTAACCCCGAAACAACCAAACTCCACACGCCCTCACTAAAACGTACGACG2371.4844973379267146No Hit
CTAACCCCGAAACAACCAAACTCCGCACGCCCTCGCTAAAACATACGACA1971.233949264015033No Hit
CTAACCCCGAAACAACCAAACTCCGCACGCCCTCACTAAAACATACGACG1851.1587848418415283No Hit
CTAACCCCGAAACAACCAAACTCCGCACGCCCTCGCTAAAACGTACAACG1781.114938928906984No Hit
CTAACCCCGAAACAACCAAACTCCACACGCCCTCGCTAAAACGTACGACA1691.0585656122768556No Hit
CTAACCCCGAAACAACCAAACTCCACACACCCTCGCTAAAACGTACAACG1410.8831819605386784No Hit
CTAACCCCGAAACAACCAGACTCCGCACGCCCTCGCTAAAACGTACGACG1290.8080175383651738No Hit
CTAACCCCGAAACAACCAAACTCCACACACCCTCACTAAAACGTACGACG1040.6514249921703728No Hit
CTAACCCCGAAACAACCAAACTCCACACGCCCTCGCTAAAACGTACAACG980.6138427810836203No Hit
CTAACCCCGAAACAACCAAACTCCGCACACCCTCGCTAAAACATACGACG960.6013153773880364No Hit
CTAACCCCGAAACAACCAAACTCCGCACGCCCTCGCTAAAACATACAACG910.5699968681490761No Hit
CTAACCCCGAAACAACCAAACTCCACACACCCTCACTAAAACGTACAACG880.5512057626057No Hit
CTAACCCCGAAACAACCAAACTCCACACACCCTCGCTAAAACATACGACG810.5073598496711557No Hit
CTAACCCCGAAACAACCAAACTCCACACGCCCTCACTAAAACATACGACG750.46977763858440336No Hit
CTAACCCCGAAACAACCAAACTCCGCACGCCCTCACTAAAACGTACGACA740.46351393673661134No Hit
CTAACCCCGAAACAACCAAACTCCGCACACCCTCGCTAAAACGTACGACA600.3758221108675227No Hit
CTAACCCCGAAACAACCAAACTCCACACACCCTCGCTAAAACGTACGACA580.3632947071719386No Hit
CTAACCCCGAAACAACCAAACTCCACACGCCCTCACTAAAACGTACGACA560.3507673034763545No Hit
CTAACCCCGAAACAACCAAACTCCGCACGCCCTCGCTAAAACGTGCGACG550.3445036016285625No Hit
CTAACCCCGAAACAACCAAACTCCGCACACCCTCGCTAAAACGTACAACG530.3319761979329784No Hit
CTGACCCCGAAACAACCAAACTCCGCACGCCCTCGCTAAAACGTACGACG500.31318509238960224No Hit
CTAACCCCGAAACAACCAAACTCCGCACACCCTCACTAAAACGTACGACG490.30692139054181017No Hit
CTAACCCCGAAACAACCAAACTCCGCACGCCCTCGCTGAAACGTACGACG470.29439398684622614No Hit
CTAACCCCGAAACAACCAAACTCCACACACCCTCACTAAAACATACGACG450.281866583150642No Hit
CTAACCCCGAAACAACCAAACTCCACACGCCCTCGCTAAAACATACGACA430.2693391794550579No Hit
CTAACCCCGAAACAACCAGACTCCACACGCCCTCGCTAAAACGTACGACG410.2568117757594739No Hit
CTAACCCCGAAACAACCAAACTCCACACACCCTCGCTAAAACGTACAACA410.2568117757594739No Hit
CTAACCCCGAAACAACCAAACTCCGCACGCCCTCGCTAAAACGTACGGCG360.2254932665205136No Hit
CTAACCCCGAAACAACCAAACTCCACACGCCCTCACTAAAACATACGACA330.2067021609771375No Hit
CTAACCCCGAAACAACCAAACTCCACACGCCCTCGCTAAAACATACAACG320.20043845912934544No Hit
CTAACCCCGAAACAACCAAACTCCGCACGCCCTCGCTAAAGCGTACGACG310.1941747572815534No Hit
CTAACCCCGAAACAACCAAACTCCGCACGCCCTCACTAAAACATACGACA300.18791105543376135No Hit
CTAACCCCGAAACAACCAAACTCCACACACCCTCGCTAAAACATACGACA300.18791105543376135No Hit
CTAACCCCGAAACAACCAAACTCCACACGCCCTCGCTAAAACGTACAACA280.17538365173817724No Hit
CTAACCCCGAAACAACCAAACTCCACACACCCTCACTAAAACGTACGACA280.17538365173817724No Hit
CTAACCCCGAAACAACCAAACTCCGCACACCCTCACTAAAACATACGACG270.16911994989038523No Hit
CTAACCCCGAAACAACCAAACTCCGCACGCCCTCGCTAAAACGTACAACA260.1628562480425932No Hit
CTAACCCCGAAACAACCAAACTCCGCACACCCTCGCTAAAACATACGACA260.1628562480425932No Hit
CGAACCCAGAGGCAACCAAAGTCCGCACGCCCTCGCTAAAACGTACGACG250.15659254619480112No Hit
CTAACCCCGAAACAACCAGACTCCGCACGCCCTCGCTAAAACATACGACG250.15659254619480112No Hit
CTAACCCCGAAACAACCAAACTCCGCACGCCCTCGCTAAAACATACAACA240.1503288443470091No Hit
CTAACCCCGAAACAACCAAACTCCACACACCCTCACTAAAACGTACAACA240.1503288443470091No Hit
CTAACCCCGAAACAACCAAACTCCGCACACCCTCGCTAAAACATACAACG230.14406514249921704No Hit
CTAACCCCGAAACAACCAAACTCCACACGCCCTCGCTAAAACGTACGGCG230.14406514249921704No Hit
CTAACCCCGAAACAACCAAACTCCGCACGCCCTCGCTAAGACGTACGACG230.14406514249921704No Hit
CTAACCCCGAAACAACCAAACTCCACACGCCCTCACTAAAACGTACAACG230.14406514249921704No Hit
CTAACCCCGAAACAACCAAACTCCGCACGCCCTCGCTAGAACGTACGACG220.137801440651425No Hit
CTAACCCCGAAACAACCAAACTCCACACACCCTCGCTAAAACATACAACG220.137801440651425No Hit
CTAACCCCGAAACAACCAAACTCCACACGCCCTCACTAAAACATACAACA210.13153773880363293No Hit
CTAACCCCGAAACAACCAAACTCCACACGCCCTCACTAAAACATACAACG210.13153773880363293No Hit
CTAACCCCGAAACAACCAAACTCCGCACGCCCTCACTAAAACGTACAACG210.13153773880363293No Hit
CTAACCCCGAGACAACCAAACTCCGCACGCCCTCGCTAAAACGTACGACG210.13153773880363293No Hit
CTAACCCCGAAACAACCAAACCCCGCACGCCCTCGCTAAAACGTACGACG210.13153773880363293No Hit
CTAACCCCGAAACAACCAAACTCCGCACGCCCCCGCTAAAACGTACGACG190.11901033510804886No Hit
CTAACCCCGAAACAACCAAACTCCACACACCCTCACTAAAACATACGACA180.1127466332602568No Hit
CTAACCCCGAAACAACCAAACTCCGCACGCCCTCGCTAGAACATACGACG180.1127466332602568No Hit
CTAACCCCGAAACAACCAGACTCCGCACACCCTCGCTAAAACGTACGACG170.10648293141246477No Hit
CTAACCCCGAAACAACCAAACTCCGCACACCCTCGCTAAAACGTACAACA160.10021922956467272No Hit
CTAACCCCGAAACAACCAGACTCCACACACCCTCACTAAAACATACAACA160.10021922956467272No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)