FastQCFastQC Report
Wed 27 Apr 2022
EGAF00005323624

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005323624
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences17821
Sequences flagged as poor quality0
Sequence length132-151
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CTAACCCCGAAACAACCAAACTCCGCACGCCCTCGCTAAAACGTACGACG645836.23814600751922No Hit
CTAACCCCGAAACAACCAAACTCCACACACCCTCACTAAAACATACAACA409722.989731215981145No Hit
CTAACCCCGAAACAACCAAACTCCACACGCCCTCGCTAAAACGTACGACG6263.5127097244823524No Hit
CTAACCCCGAAACAACCAAACTCCACACGCCCTCGCTAAAACGTACGACA3942.210874810616688No Hit
CTAACCCCGAAACAACCAAACTCCGCACGCCCTCGCTAAAACGTACGACA3932.205263453229336No Hit
CTAACCCCGAAACAACCAAACTCCGCACGCCCTCACTAAAACGTACGACG3692.070590875932888No Hit
CTAACCCCGAAACAACCAAACTCCGCACGCCCTCACTAAAACATACGACA1921.0773806183715842No Hit
CTAACCCCGAAACAACCAGACTCCGCACGCCCTCGCTAAAACGTACGACG1861.0437124740474721No Hit
CTAACCCCGAAACAACCAAACTCCGCACGCCCTCGCTAAAACATACGACG1811.015655687110712No Hit
CTAACCCCGAAACAACCAAACTCCGCACGCCCTCACTAAAACATACAACA1801.0100443297233601No Hit
CTAACCCCGAAACAACCAAACTCCGCACACCCTCACTAAAACATACAACA1660.9314853263004321No Hit
CTAACCCCGAAACAACCAAACTCCGCACACCCTCGCTAAAACGTACGACG1420.796812749003984No Hit
CTAACCCCGAAACAACCAGACTCCACACACCCTCACTAAAACATACAACA1290.723865102968408No Hit
CTAACCCCGAAACAACCAAACTCCGCACGCCCTCGCTAAAACGTACAACG1180.662140171707536No Hit
CTGACCCCGAAACAACCAAACTCCGCACGCCCTCGCTAAAACGTACGACG850.47696537792492005No Hit
CTAACCCCGAAACAACCAAACTCCACACACCCTCACTAAAACATACGACA840.47135402053756803No Hit
CTAACCCCGAAACAACCAAACTCCGCACGCCCTCGCTAAAACGTACGGCG800.44890859098816No Hit
CTAACCCCGAAACAACCAAACTCCACACGCCCTCACTAAAACATACAACA660.37034958756523206No Hit
CTAACCCCGAAACAACCAAACTCCGCACGCCCTCGCTGAAACGTACGACG610.342292800628472No Hit
CTAACCCCGAAACAACCAAACTCCACACGCCCTCACTAAAACGTACGACG600.33668144324112004No Hit
CTAACCCCGAAACAACCAAACTCCGCACGCCCTCACTAAAACGTACGACA560.31423601369171206No Hit
CTAACCCCGAAACAACCAAACTCCGCACGCCCTCGCTAAAACATACGACA540.303013298917008No Hit
CTAACCCCGAAACAACCAAACTCCGCACGCCCTCGCTAAAACGTACAACA530.29740194152965604No Hit
CTAACCCCGAAACAACCAAACTCCACACACCCTCACTAAAACATACAACG530.29740194152965604No Hit
CTAACCCCGAAACAACCAAACTCCGCACGCCCTCACTAAAACATACGACG530.29740194152965604No Hit
CTAACCCCGAAACAACCAAACTCCGCACGCCCTCGCTAAAACGTGCGACG520.291790584142304No Hit
CTAACCCCGAAACAACCAAACTCCACACGCCCTCACTAAAACATACGACG470.263733797205544No Hit
CTAACCCCGAAACAACCAAACTCCGCACGCCCTCGCTAGAACGTACGACG470.263733797205544No Hit
CTAACCCCGAAACAACCAAACTCCGCACGCCCTCGCTAAGACGTACGACG460.258122439818192No Hit
CTGACCCCGAAACAACCAAACTCCACACACCCTCACTAAAACATACAACA410.23006565288143205No Hit
CTAACCCCGAAACAACCAAACTCCGCACGCCCTCGCTAAAGCGTACGACG410.23006565288143205No Hit
CTAACCCCGAAACAACCAAACTCCACACGCCCTCGCTAAAACATACGACG380.21323158071937603No Hit
CTAACCCCGAAACAACCAAACTCCACACACCCTCACTAAAACATACAGCA370.20762022333202404No Hit
CTAACCCCGAAACAACCAAACTCCGCACGCCCTCGCTAAAACGCACGACG370.20762022333202404No Hit
CTAACCCCGAAACAACCAAACTCCACACACCCTCACTAAAACATGCAACA320.179563436395264No Hit
CTAACCCCGAAACAACCAACTCCGCACGCCCTCGCTAAAACGTACGACGT320.179563436395264No Hit
CTAACCCCGAAACAACCAAACTCCACACGCCCTCGCTAAAACATACGACA320.179563436395264No Hit
CTAACCCCGAAACAACCAAACTCCACACACCCTCACTAAAGCATACAACA300.16834072162056002No Hit
CTAACCCCGAAACAACCAAACTCCACACACCCTCACTGAAACATACAACA260.145895292071152No Hit
CTAACCCCGAAACAACCAAACTCCACACACCCTCACTAGAACATACAACA260.145895292071152No Hit
CTAACCCCGAAACAACCAAACTCCGCACACCCTCACTAAAACATACGACA260.145895292071152No Hit
CTAACCCCGAAACAACCAAACTCCACACACCCTCGCTAAAACATACAACA250.14028393468380002No Hit
CTAACCCCGAAACAACCAAACTCCACACACCCTCGCTAAAACGTACGACG240.13467257729644802No Hit
CTAACCCCGAGACAACCAAACTCCGCACGCCCTCGCTAAAACGTACGACG240.13467257729644802No Hit
CTAACCCCGAAACAACCAAACCCCACACACCCTCACTAAAACATACAACA240.13467257729644802No Hit
CTAACCCCGAAACAACCAGACTCCACACGCCCTCGCTAAAACGTACGACG230.129061219909096No Hit
CTAACCCCGAAACAACCAAACTCCACACGCCCTCACTAAAACATACGACA230.129061219909096No Hit
CTAACCCCGAAACAACCAAACTCCGCACGCCCTCGCTAAAACATACAACA230.129061219909096No Hit
CTAACCCCGAAACAACCAAACTCCGCACGCCCTCGCTAAAACGGACGACG220.123449862521744No Hit
CTAACCCCGAAACAACCAAACCCCGCACGCCCTCGCTAAAACGTACGACG220.123449862521744No Hit
CTAACCCCGAAACAACCAAACTCCGCACACCCTCGCTAAAACATACAACA200.11222714774704No Hit
CGAACCCAGAGGCAACCAAAGTCCACACACCCTCACTAAAACATACAACA180.10100443297233601No Hit
CTAACCCCGAACAACCAAACTCCGCACGCCCTCGCTAAAACGTACGACGT180.10100443297233601No Hit
CTAACCCCGAAACAACCAAACTCCACACACCCTCACTAAAACGTACAACA180.10100443297233601No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)