FastQCFastQC Report
Wed 27 Apr 2022
EGAF00005323629

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005323629
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences15647
Sequences flagged as poor quality0
Sequence length150-151
%GC43

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GAAAATTTATAAGATTGCGTAAAGTTGTAAGGTTCGGAGTTTCGTGCGGT1082569.18259091199592No Hit
GAAAATTTATAAGATTGCGTAAAGTTGTAAGGTTTGGAGTTTTGTGTGGT176711.292899597366908No Hit
GAAAATTTATAAGATTGCGTAAAGTTGTAAGGTTCGGAGTTTTGTGCGGT3041.942864446858823No Hit
GAAAATTTATAAGATTGCGTAAAGTTGTAAGGTTTGGAGTTTCGTGCGGT2061.3165463028056497No Hit
GAAAATTTATAAGATTGCGTAAAGTTGTAAGGTTCGGAGTTTCGTGTGGT1941.2398542851664855No Hit
GAAAATTTATAAGATTGCGTAAAGTTGTAAGGTTCGGAGCTTCGTGCGGT1000.6391001469930337No Hit
GAAAATTTATAAGATTGCGTAAAGTTGTAAGATTCGGAGTTTCGTGCGGT930.5943631367035215No Hit
GAAAATTTATAAGATTGCGTAAAGTTGTAAGGTTTGGAGTTTTGTGCGGT860.5496261264140091No Hit
GAAAATTTATAAGATTGCGTAAAGTTGTAAGGTTCGGAGTTCCGTGCGGT820.5240621205342877No Hit
GAAAATTTATAAGATTGCGTAAAGTTGTAAGGTTCGGAGTTTCGTGCGGC650.41541509554547196No Hit
GAAAATTTATAAGATTGCGTAAAGTTGTAAGGTTCGGAGTCTCGTGCGGT630.40263309260561125No Hit
GAAAATTTATAAGATTGCGTAAAGTTGTAAGGTCCGGAGTTTCGTGCGGT590.37706908672588996No Hit
GAAAATTTATAAGATTGCGTAAAGTTGTAAGGCTCGGAGTTTCGTGCGGT590.37706908672588996No Hit
GTAAATTTATAAGATTGCGTGAAGTTGTAAGGTTCGGAGTTTCGTGCGGT540.3451140793762383No Hit
GAAAATTTATAAGATTGCGTAAAGTTGTAGGGTTCGGAGTTTCGTGCGGT490.31315907202658655No Hit
GAAAATTTATAAGATTGCGTAAAGTTGTAAAGTTCGGAGTTTCGTGCGGT480.3067680705566562No Hit
GAAAATTTATAAGATTGCGTAAAGTTATAAGGTTCGGAGTTTCGTGCGGT370.2364670543874225No Hit
GAAAATTTATAAGATTGCGTAAAGTTGTAAGGTTCGGAGTTTTGTGTGGT290.18533904262797982No Hit
GAAAATTTATAAGATTGCGTAAAGTTGTAAGGTTCGGAGGTTCGTGCGGT280.17894804115804946No Hit
GTTGACATAGGACTTTCCGAGAAGTAGTAACGTTAGGTGGGGCGTGCGGT270.17255703968811914No Hit
GTAAATTTATAAGATTGCGTAAAGTTGTAAGGTTCGGAGTTTCGTGCGGT250.15977503674825844No Hit
GAAAATTTATAAGATTACGTAAAGTTGTAAGGTTCGGAGTTTCGTGCGGT240.1533840352783281No Hit
GAAAATTTATAAGATTCCGTAAAGTAGTAAGGTTCGGTGTTTCGTGCGGT240.1533840352783281No Hit
GAAAATTTATAAGATTGCATAAAGTTGTAAGGTTCGGAGTTTCGTGCGGT230.1469930338083978No Hit
GAAAATTTATAAGATTGCGTAAAGTTGTAAGGTTCGGAGTTTCGCGCGGT230.1469930338083978No Hit
GAAAATTTATAAGATTGCGTAAAATTGTAAGGTTCGGAGTTTCGTGCGGT210.13421103086853708No Hit
GAAAATCTATAAGATTGCGTAAAGTTGTAAGGTTCGGAGTTTCGTGCGGT200.12782002939860676No Hit
GAAAATTTATAAGATTGCGTAAAGCTGTAAGGTTCGGAGTTTCGTGCGGT180.11503802645874608No Hit
GAAAATTTATAAGATTGCGTAAAGTTGTAAGGTTCGGGGTTTCGTGCGGT170.10864702498881575No Hit
GAAAATTTATAAGATTGTGTAAAGTTGTAAGGTTCGGAGTTTCGTGCGGT160.10225602351888541No Hit
GAAAATTTATAAGATTGCGTAAAGTTGTAAGGTCTGGAGTTTTGTGTGGT160.10225602351888541No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)