FastQCFastQC Report
Wed 27 Apr 2022
EGAF00005323638

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005323638
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences12502
Sequences flagged as poor quality0
Sequence length146-151
%GC42

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CTAACCCCGAAACAACCAAACTCCGCACGCCCTCGCTAAAACGTACGACG681454.50327947528395No Hit
CTAACCCCGAAACAACCAAACTCCACACACCCTCACTAAAACATACAACA208316.661334186530155No Hit
CTAACCCCGAAACAACCAGACTCCGCACGCCCTCGCTAAAACGTACGACG1841.4717645176771716No Hit
CTAACCCCGAAACAACCAAACTCCGCACGCCCTCGCTAAAACATACGACG1531.2238041913293873No Hit
CTAACCCCGAAACAACCAAACTCCGCACGCCCTCACTAAAACGTACGACG1461.1678131498960167No Hit
CTAACCCCGAAACAACCAAACTCCGCACGCCCTCGCTAAAACGTACAACG1321.0558310670292754No Hit
CTAACCCCGAAACAACCAAACTCCACACGCCCTCGCTAAAACGTACGACG1170.9358502639577668No Hit
CTAACCCCGAAACAACCAAACTCCGCACGCCCTCGCTAAAACGTACGACA1140.911854103343465No Hit
CTAACCCCGAAACAACCAAACTCCGCACACCCTCGCTAAAACGTACGACG1070.8558630619100943No Hit
CTGACCCCGAAACAACCAAACTCCGCACGCCCTCGCTAAAACGTACGACG810.6478963365861462No Hit
CTAACCCCGAAACAACCAAACTCCGCACGCCCTCGCTAAAACGTACGGCG720.5759078547432411No Hit
CTAACCCCGAAACAACCAAACTCCGCACGCCCTCGCTAAAGCGTACGACG600.47992321228603424No Hit
CTAACCCCGAAACAACCAGACTCCACACACCCTCACTAAAACATACAACA590.471924492081267No Hit
CTAACCCCGAAACAACCAAACTCCGCACGCCCTCGCTGAAACGTACGACG540.43193089105743077No Hit
CTAACCCCGAAACAACCAAACTCCGCACGCCCTCGCTAAGACGTACGACG510.40793473044312906No Hit
CTAACCCCGAAACAACCAAACTCCGCACGCCCTCGCTAAAACGTGCGACG440.3519436890097585No Hit
CTAACCCCGAAACAACCAAACTCCGCACGCCCTCGCTAGAACGTACGACG350.2799552071668533No Hit
CTAACCCCGAGACAACCAAACTCCGCACGCCCTCGCTAAAACGTACGACG330.26395776675731886No Hit
CTAACCCCGAAACAACCAAACTCCGCACGCCCTCGCTAAAACGCACGACG330.26395776675731886No Hit
CTAACCCCGAAACAACCAAACTCCACACGCCCTCACTAAAACATACAACA320.2559590465525516No Hit
CTAACCCCGAAACAACCAAACTCCACACACCCTCACTAAAACATACGACA300.23996160614301712No Hit
CTAACCCCGAAACAACCAAACTCCACACACCCTCACTAAAACATACAACG290.2319628859382499No Hit
CTAACCCCGAAACAACCAAACTCCGCACACCCTCACTAAAACATACAACA290.2319628859382499No Hit
CTAACCCCGAAACAACCAAACCCCGCACGCCCTCGCTAAAACGTACGACG290.2319628859382499No Hit
CTAACCCCGAAACAACCAACTCCGCACGCCCTCGCTAAAACGTACGACGT260.20796672532394817No Hit
CTAACCCCGAAACAACCAAACTCCACACGCCCTCACTAAAACATACGACG250.19996800511918092No Hit
CTAACCCCGAAACAACCAAACTCTGCACGCCCTCGCTAAAACGTACGACG240.1919692849144137No Hit
CGAACCCAGAGGCAACCAAAGTCCGCACGCCCTCGCTAAAACGTACGACG240.1919692849144137No Hit
CTAACCCCGAAACAACCAAACTCCACACACCCTCACTAAAACATACAGCA230.18397056470964646No Hit
CTAACCCCGAAGCAACCAAACTCCGCACGCCCTCGCTAAAACGTACGACG210.16797312430011196No Hit
CTAACCCCGAAACAACCAAACTCCGCACGCCCTCGCCAAAACGTACGACG210.16797312430011196No Hit
CTAACCCCGAAACAACAAACTCCGCACGCCCTCGCTAAAACGTACGACGT200.15997440409534475No Hit
CTAACCCCGAAACAACCAAACTCCGCACGCCCCCGCTAAAACGTACGACG190.1519756838905775No Hit
CTGACCCCGAAACAACCAAACTCCACACACCCTCACTAAAACATACAACA180.14397696368581028No Hit
CTAACCCCGAAACAACCAAACTCCACACACCCTCGCTAAAACATACAACA170.13597824348104304No Hit
CTAACCCCGAAACAACCAAACTCCACACACCCTCACTAAAACATACGACG160.1279795232762758No Hit
CTAACCCCGAAACAACCAAACTCCGCGCGCCCTCGCTAAAACGTACGACG160.1279795232762758No Hit
CTAACCCCGAAACAACCAAGCTCCGCACGCCCTCGCTAAAACGTACGACG160.1279795232762758No Hit
CGAACCCAGAGGCAACCAAAGTCCACACACCCTCACTAAAACATACAACA150.11998080307150856No Hit
CTAACCCCGAAACAACCAAACTCCACACACCCTCACTAAAACATGCAACA150.11998080307150856No Hit
CTAACCCCGAAACAACCAAACTCCGCACGCCCTCGCTAAAACGGACGACG150.11998080307150856No Hit
CTAACCCCGAAACAACCAAACCCCACACACCCTCACTAAAACATACAACA140.11198208286674133No Hit
CTAACCCCGAAACAACCAAACTCCACACACCCTCACTAAAGCATACAACA130.10398336266197408No Hit
CTAACCCCGAAACAACCAAACTCCACACACCCTCACTAAGACATACAACA130.10398336266197408No Hit
CTAACCCTGAAACAACCAAACTCCGCACGCCCTCGCTAAAACGTACGACG130.10398336266197408No Hit
CTAACCCCGAAACAACCAAACTCCACACACCCTCACTAAAACGTACAACA130.10398336266197408No Hit
CTAACCCCGAAACAACTAAACTCCGCACGCCCTCGCTAAAACGTACGACG130.10398336266197408No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)