FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005329732

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005329732
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1187317
Sequences flagged as poor quality0
Sequence length49-150
%GC39

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCCCACC14808.063962E-77.46389061
CCTGACC13306.338404E-46.35140471
CTCAAGT13406.939827E-46.3040061
GGGGGGG86150.05.7857914140-144
CCAGCAC15757.621003E-45.7759781
CCCAGAA19553.680022E-45.3180361
CCCAAAT20708.2425843E-45.02258971
Produced by FastQC (version 0.11.5)