FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005329734

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005329734
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1263034
Sequences flagged as poor quality0
Sequence length49-150
%GC38

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CAGAGGT15100.00217771025.73115251
CCCAGCT21152.293795E-55.6654931
CCACCAT17650.00237127655.28030351
GCCAGGC17850.00274304675.21928022
CAAAAGG19450.00142800835.13389831
Produced by FastQC (version 0.11.5)