FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005329735

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005329735
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1263034
Sequences flagged as poor quality0
Sequence length49-150
%GC38

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTGACAA10850.00265876746.7550881
CAGGTCG3400.00444253166.4328628140-144
TCGTGTA5053.4601813E-55.8651214135-139
CGGGGGG6902.6282341E-65.763303140-144
CAAAAAT53300.05.37538151
CACACAC42401.3114914E-95.02865841
Produced by FastQC (version 0.11.5)