FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005329756

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005329756
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1151362
Sequences flagged as poor quality0
Sequence length49-150
%GC39

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTAGGTC3400.0023278512.5441788
GGGGGGG116300.07.262802140-144
GGCGGGG6203.5756057E-66.7918296140-144
CCGTCTT5251.3534217E-46.605387140-144
TATGCCG4700.00151973726.324307140-144
CGTCTTC5450.00151575365.9084883140-144
CCACAAA17702.2162864E-45.51080561
CGTATGC5150.00213502815.3254094125-129
Produced by FastQC (version 0.11.5)