FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005330368

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005330368
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences41410595
Sequences flagged as poor quality0
Sequence length101
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGCCGTA86250.011.31626746-47
CGTATCA89250.011.06775350-51
GCCGTAT90150.010.93198948-49
CCGTATC98000.010.10477848-49
TCGCCGT108050.09.12102846-47
GTCGCCG123500.08.13387744-45
GGTCGCC153500.06.729844644-45
TGGTCGC149550.06.63763742-43
GTGGTCG185400.05.520662342-43
GTATCAT199550.05.50939150-51
GTAGATC433850.05.002519694-95
Produced by FastQC (version 0.11.5)