FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005330413

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005330413
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences52069228
Sequences flagged as poor quality0
Sequence length101
%GC48

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGTATGC65900.06.63084544-45
TATGCCG68000.06.427751546-47
CTCGTAT68850.06.03618142-43
TCGTATG66350.05.26143942-43
Produced by FastQC (version 0.11.5)