FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005330507

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005330507
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences39679915
Sequences flagged as poor quality0
Sequence length101
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TATGCCG418400.021.92989746-47
CGATGTA186250.019.94112634-35
CGTCTGA798000.019.4838716-17
TGCCGTC475700.019.31830248-49
CCGTCTT482650.019.07456650-51
CACGTCT822150.018.9655114-15
ATGCCGT444450.018.30440348-49
CACACGT856450.018.27738212-13
ACCGATG205850.018.19237932-33
AGATCGG841150.018.0554371
GCCGTCT468800.017.43469850-51
CCAGTCA914550.016.9697226-27
CGTATGC542350.016.96176744-45
ATCGGAA975550.016.8927782
GTATGCC488650.016.8771146-47
GATCGGA981150.016.791231
CTCGTAT542250.016.64092342-43
TCGGAAG1000200.016.4669593
AACGATC99500.016.37238338-39
CGGAAGA1009700.016.2885074
Produced by FastQC (version 0.11.5)