FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005330876

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005330876
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences7107572
Sequences flagged as poor quality0
Sequence length101
%GC44

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGCCGTA36800.09.2320994-95
GCCGTAT35550.08.82157594-95
CGTATCA29650.07.612209394-95
CCGTATC32900.07.43794894-95
TCGCCGT42050.07.28804492-93
GTCGCCG48500.07.00496794-95
GGTCGCC55100.06.640196394-95
TGGTCGC55650.06.617262494-95
GTGGTCG63550.06.09373994-95
TCGGTGG86400.05.939526694-95
ATCTCGG99700.05.59995594-95
GCTCGTG11850.00115652825.59070541
CGGTGGT77400.05.37166594-95
GATCTCG105000.05.33991794-95
TCTCGGT91750.05.30805192-93
CTCGGTG91850.05.224972794-95
Produced by FastQC (version 0.11.5)