FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005330905

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005330905
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences35228909
Sequences flagged as poor quality0
Sequence length101
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TATGCCG67600.08.69973146-47
CGTATGC73450.08.15744244-45
CTCGTAT83300.07.040250342-43
TCGTATG74050.06.989845842-43
ATGCCGT92650.05.98778346-47
CGCCAAT137350.05.825568794-95
TATCTCG87600.05.718954638-39
TGCCGTC117600.05.5070348-49
ATCTCGT112550.05.44265340-41
CCGTCTT118500.05.4049350-51
TCTCGTA94750.05.387604740-41
GCCGTCT106700.05.154700348-49
GTCACGC194550.05.076906794-95
Produced by FastQC (version 0.11.5)