FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005330907

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005330907
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences41384371
Sequences flagged as poor quality0
Sequence length101
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TATGCCG132600.012.19081546-47
CGTATGC151750.010.65377144-45
CTCGTAT173650.09.20197742-43
CCGTCTT179200.09.16679750-51
TGCCGTC187850.08.8207348-49
ATGCCGT164950.07.360789346-47
GCCGTCT171350.07.18311748-49
TCGTATG161450.07.16195842-43
ATCTCGT224650.07.070674440-41
GTATGCC212500.05.918612544-45
TCTCGTA196300.05.89046840-41
CGTCTTC225000.05.76660950-51
TGCTTGA327600.05.51582958-59
CATCTCG273550.05.060255594-95
Produced by FastQC (version 0.11.5)