FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005331028

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005331028
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences7941174
Sequences flagged as poor quality0
Sequence length101
%GC48

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGCCGTA8950.08.22424746-47
CCGTATC13200.06.476303648-49
TAGTGCG5200.00143848675.93483144-45
GTCGCCG13255.456968E-125.912435544-45
GCCGTAT9702.468605E-75.63060148-49
CGTATCA10301.4054967E-75.5340850-51
TCGTGTA53900.05.24547394-95
CGTGTAG53250.05.22026794-95
Produced by FastQC (version 0.11.5)