FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005331046

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005331046
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences53798111
Sequences flagged as poor quality0
Sequence length126
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGTCGTG611150.013.275592120
AGCGTCG767800.013.226407120
TCGTGTA485950.013.149112120
GTCGTGT561050.013.016026120
CGTGTAG459600.012.413377120
GCGTCGT667900.012.084653120
GAGCGTC917850.012.078315120
AAGAGCG1183650.011.674537120
AGAGCGT1009450.011.44039120
TCGGAAG1730300.010.790602120
GATCGGA1953850.010.56108120
ATCGGAA1812950.010.55705120
AGATCGG2161250.010.3117485120
GTGTAGG546350.010.2445135120
CGGAAGA1635600.010.141284120
TAGATCG297850.09.557121120
CAGATCG902300.08.965262120
GCGTCGG100400.08.733041120
AAGATCG671550.08.567094120
GAAGAGC1810850.08.254462120
Produced by FastQC (version 0.11.5)