FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005331047

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005331047
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences86030796
Sequences flagged as poor quality0
Sequence length126
%GC44

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ACACGTC844950.010.13591120
GATCGGA2333000.09.953687120
ACGTCTG738400.09.949739120
ATCGGAA2193700.09.931865120
AGATCGG2573450.09.782468120
TCGGAAG2112700.09.759216120
CGTCTGA662550.09.715214120
CACGTCT835450.09.500906120
GCACACG1123850.09.438523120
TAGATCG480350.09.435388120
CGGAAGA2022400.09.178746120
CACACGT1038100.08.929289120
CAGATCG1126050.08.67611120
AAGATCG811350.08.43116120
AGAGCAC1837850.07.6507564120
GAGATCG899850.07.3072567120
GAGCACA1787850.07.271412120
AGCACAC1595250.07.178349120
GAAGAGC2396900.07.0053673120
AAGAGCA2403650.06.509283120
Produced by FastQC (version 0.11.5)