FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005331049

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005331049
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences65370497
Sequences flagged as poor quality0
Sequence length126
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGTCTGA659350.013.737302120
ACACGTC920900.012.726237120
ACGTCTG768600.012.450683120
CACGTCT879350.012.094797120
GCACACG1253550.011.996279120
CACACGT1139700.011.79433120
ATCGGAA3005450.011.177344120
CGGAAGA2618650.011.133386120
TCGGAAG2801800.010.9967165120
GATCGGA3257050.010.687425120
AGAGCAC2021300.010.627766120
AGATCGG3600500.010.601298120
AGCACAC1687450.010.431998120
TAGATCG1153350.010.286668120
GAGCACA1892900.09.885149120
AAGATCG1221300.09.660102120
GAAGAGC2646750.09.322291120
CAGATCG871300.09.248218120
AAGAGCA2533750.09.124814120
GAGATCG1185450.09.063193120
Produced by FastQC (version 0.11.5)