FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005331083

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005331083
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences68951774
Sequences flagged as poor quality0
Sequence length126
%GC44

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ACACGTC1411850.011.569976120
ACGTCTG1182350.011.427415120
CGTCTGA1061250.011.182531120
CACGTCT1331350.011.147972120
GCACACG1808850.011.117704120
CACACGT1652950.010.796667120
CGGAAGA3473400.09.743836120
ATCGGAA3936650.09.736683120
TCGGAAG3706300.09.732624120
GATCGGA4235000.09.538402120
AGCACAC2301350.09.410852120
AGAGCAC2727200.09.391862120
GAGCACA2573500.09.204102120
AGATCGG4609950.09.183159120
GAAGAGC3483300.08.831129120
AAGAGCA3314850.08.778577120
CAGATCG2100100.08.446251120
GAGATCG1623300.08.408605120
TAGATCG530100.08.166619120
AAGATCG1145850.08.128937120
Produced by FastQC (version 0.11.5)