FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005331087

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005331087
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences58141081
Sequences flagged as poor quality0
Sequence length126
%GC44

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ACACGTC726950.012.09048120
CGTCTGA538100.011.654148120
CACGTCT696650.011.587319120
ACGTCTG605600.011.558808120
CACACGT883000.011.359163120
GCACACG971350.011.237644120
GATCGGA2433350.010.99186120
ATCGGAA2251250.010.861458120
CGGAAGA1984300.010.8593645120
TCGGAAG2121150.010.783556120
AGATCGG2693950.010.740286120
TAGATCG459700.09.789012120
AGAGCAC1585900.09.564731120
AGCACAC1329600.09.528204120
GAGCACA1501250.09.036664120
CAGATCG1077350.08.918599120
AAGATCG826200.08.910023120
GAAGAGC2078250.08.866955120
GAGATCG925400.08.49236118-119
AAGAGCA2032450.08.42655120
Produced by FastQC (version 0.11.5)