FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005331113

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005331113
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14165200
Sequences flagged as poor quality0
Sequence length126
%GC43

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CACGTCT185300.011.848774120
CGTCTGA139950.011.444744120
GCACACG252600.011.209247120
ACACGTC192150.011.176618120
ACGTCTG159450.010.985659120
ATCGGAA581200.010.806594120
CGGAAGA512800.010.70387120
GATCGGA626150.010.672706120
CACACGT232600.010.548273120
TCGGAAG544900.010.524678120
AGATCGG689550.010.265592120
GAGCACA382550.010.035974120
AGAGCAC406650.09.72148120
AAGATCG238900.09.491686120
AGCACAC349200.09.328103120
TAGATCG224750.09.15508120
GAAGAGC524700.09.031997120
CAGATCG163700.08.978115120
AAGAGCA516850.08.832586120
GAGATCG215900.08.724585120
Produced by FastQC (version 0.11.5)