FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005331127

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005331127
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences61381630
Sequences flagged as poor quality0
Sequence length126
%GC43

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGTCTGA1126200.012.278702120
ACACGTC1527200.011.981218120
ACGTCTG1270600.011.818138120
CCGTACG140200.010.997201120
CACGTCT1423950.010.949861120
CACACGT1764150.010.820858120
GCACACG1913100.010.737251120
CGTACGT130700.010.511313120
ACCGTAC189550.09.30509120
AGCACAC2370100.09.264276120
AGAGCAC2794300.09.148198120
GAGCACA2631050.09.079652120
TCGGAAG3797050.08.964788120
CGGAAGA3573100.08.957489120
GTCTGAA1442900.08.922582120
ATCGGAA4034650.08.903749120
GATCGGA4312900.08.764702120
TCTGAAC1326100.08.550324120
GAAGAGC3469800.08.491072120
AGATCGG4658500.08.393929120
Produced by FastQC (version 0.11.5)