FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005331263

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005331263
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13827155
Sequences flagged as poor quality0
Sequence length126
%GC43

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ACGTCTG160400.011.258029120
CACACGT232100.011.062896120
CACGTCT182400.010.919769120
GCACACG248400.010.868288120
ACACGTC188550.010.849957120
AGATCGG639800.010.201989120
CGTCTGA143350.09.709322118-119
TCGGAAG512250.09.7089615120
ATCGGAA542900.09.636002120
CGGAAGA485250.09.53211120
AGTCACG50400.09.52269120
GATCGGA578650.09.310234120
TAGATCG150800.09.269467120
AGAGCAC396500.08.942203120
AAGATCG200000.08.908954120
AGCACAC328900.08.828394120
GAGCACA370200.08.718586120
GAGATCG207650.08.465175120
GAAGAGC513100.08.453499120
CAGATCG223500.08.44193118-119
Produced by FastQC (version 0.11.5)